Genetic diversity and population structure of common bean (Phaseolus vulgaris L.) accessions through retrotransposon-based interprimer binding sites (iPBSs) markers

Basit Öğe Kaydı
dc.contributor.authorNemli, Seda
dc.contributor.authorKıanoosh, Tala
dc.contributor.authorTanyolaç, Muhammed Bahattin
dc.date.accessioned2020-12-01T12:26:01Z
dc.date.available2020-12-01T12:26:01Z
dc.date.issued2015
dc.departmentEge Üniversitesien_US
dc.description.abstractThe common bean (Phaseolus vulgaris L.) is an important crop throughout the world and is highly recommended for many developing countries due to its nutritional components. A retrotransposon-based DNA marker system, interprimer binding sites (iPBSs), developed from reverse transcriptase primer binding sites, was used to determine genetic diversity in common bean accessions. the genetic polymorphism and effectiveness of the marker system were evaluated. A total of 180 polymorphic bands were detected using 47 iPBS primers among 67 common bean accessions, with an average of 4 polymorphic fragments per primer. the genetic similarity between accessions was calculated using the software NTSYS-pc and ranged from 0.09 to 0.99. the average polymorphism information content value for the iPBS markers was 0.73. A model-based clustering method classified the common bean accessions into 4 populations using STRUCTURE software. the results indicated that the iPBS marker method can successfully determine the genetic diversity level in common bean accessions.en_US
dc.identifier.endpage948en_US
dc.identifier.issn1300-011X
dc.identifier.issn1303-6173
dc.identifier.issue6en_US
dc.identifier.startpage940en_US
dc.identifier.urihttps://app.trdizin.gov.tr//makale/TVRnMk9EQXpNdz09
dc.identifier.urihttps://hdl.handle.net/11454/65470
dc.identifier.volume39en_US
dc.indekslendigikaynakTR-Dizinen_US
dc.language.isoenen_US
dc.relation.ispartofTurkish Journal of Agriculture and Forestryen_US
dc.relation.publicationcategoryMakale - Ulusal Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/openAccessen_US
dc.subjectOrman Mühendisliğien_US
dc.titleGenetic diversity and population structure of common bean (Phaseolus vulgaris L.) accessions through retrotransposon-based interprimer binding sites (iPBSs) markersen_US
dc.typeArticleen_US

Dosyalar

Koleksiyon

TR-Dizin İndeksli Yayınlar Koleksiyonu