Genetic variation among pathotypes of Verticillium dahliae Kleb. from cotton in western Turkey revealed by AFLP

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dc.contributor.authorErdogan, Oktay
dc.contributor.authorNemli, Seda
dc.contributor.authorOncu, Tulay
dc.contributor.authorTanyolac, Bahattin
dc.date.accessioned2019-10-27T21:51:52Z
dc.date.available2019-10-27T21:51:52Z
dc.date.issued2013
dc.departmentEge Üniversitesien_US
dc.description.abstractCotton (Gossypium hirsutum L.) is crucial for the textile industry worldwide. Among the diseases attacking cotton, Verticillium wilt caused by Verticillium dahliae Kleb. is the most significant. Isolates of V. dahliae can be classified into defoliating and non-defoliating pathotypes. Thirty-two isolates of the non-defoliating pathotype and one isolate of a virulent, defoliating pathotype were analysed by the amplified fragment length polymorphism (AFLP) method. Three hundred and forty AFLP fragments were obtained with nine primer combinations. The number of total bands per primer pair ranged from 16 to 81, with an average of 37.7. The average polymorphism information content (PIC) value for the AFLP products was 0.50. Using the genotypic data, genetic distance analysis was performed. The maximum variation was found between isolates (Vd11) Nazilli and (Vd16) Soke, at a value of 0.79 and the minimum variation was found between isolates (Vd20) Aydin and (Vd14) Soke, at 0.24. The unweighted paired group method with arithmetic averages cluster analysis (UPGMA) was used to discriminate the V. dahliae isolates into five subgroups. Defoliating pathotypes (Vd33) from Soke province formed a single subgroup. As a result, it was found that there was significant variation among Verticillium isolates. AFLP analysis is an efficient and effective marker technology for determining genetic relationships among Verticillium isolates.en_US
dc.identifier.doi10.1080/07060661.2013.809790
dc.identifier.endpage362en_US
dc.identifier.issn0706-0661
dc.identifier.issn1715-2992
dc.identifier.issn0706-0661en_US
dc.identifier.issn1715-2992en_US
dc.identifier.issue3en_US
dc.identifier.scopusqualityQ2en_US
dc.identifier.startpage354en_US
dc.identifier.urihttps://doi.org/10.1080/07060661.2013.809790
dc.identifier.urihttps://hdl.handle.net/11454/47344
dc.identifier.volume35en_US
dc.identifier.wosWOS:000327295000009en_US
dc.identifier.wosqualityQ3en_US
dc.indekslendigikaynakWeb of Scienceen_US
dc.indekslendigikaynakScopusen_US
dc.language.isoenen_US
dc.publisherTaylor & Francis Ltden_US
dc.relation.ispartofCanadian Journal of Plant Pathologyen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/closedAccessen_US
dc.subjectAFLPen_US
dc.subjectcottonen_US
dc.subjectgenetic diversityen_US
dc.subjectVerticillium wilten_US
dc.subjectpathotypeen_US
dc.titleGenetic variation among pathotypes of Verticillium dahliae Kleb. from cotton in western Turkey revealed by AFLPen_US
dc.typeArticleen_US

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