Genetic structuring of Pseudopus apodus (Pallas, 1775) (Sauria: Anguidae) in north Anatolia, Turkey

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dc.contributor.authorKeskin, Emre
dc.contributor.authorTok, Cemal Varol
dc.contributor.authorHayretdag, Sibel
dc.contributor.authorCicek, Kerim
dc.contributor.authorAyaz, Dincer
dc.date.accessioned2019-10-27T22:07:52Z
dc.date.available2019-10-27T22:07:52Z
dc.date.issued2013
dc.departmentEge Üniversitesien_US
dc.description.abstractIn this study, mitochondrial 16S rRNA and cytochrome b sequences were used to infer the genetic structure of Pseudopus apodus (Pallas, 1775) populations sampled from 40 North latitude of Turkey. Mean percent G-C contents of 47.13 and 46.66 were determined for 16S rRNA and cytochrome b datasets, respectively. Two haplotypes were found using 16S rRNA dataset, with 6 variable loci and a haplotype diversity of 0.1053, while Cytochrome b dataset consist of 10 haplotypes, with 18 variable loci and a haplotype diversity of 0.1943. Also mean genetic distance was found to be eight times higher in the cytochrome b dataset. Kimura 2-parameter genetic distance matrix was evaluated together with neighbor joining tree and median joining network in order to reveal possible divergence points in both datasets. Results indicated signs of 3 regional populations, including potential cryptic species from Digor or subspecies from Samsun and Sinop. (C) 2013 Elsevier Ltd. All rights reserved.en_US
dc.description.sponsorshipScientific and Technological Research Council of Turkey (TUBITAK)Turkiye Bilimsel ve Teknolojik Arastirma Kurumu (TUBITAK) [108T559]; Biotechnology Institute of Ankara UniversityAnkara University; TUBITAKTurkiye Bilimsel ve Teknolojik Arastirma Kurumu (TUBITAK)en_US
dc.description.sponsorshipThis study constitutes part of a project [Project No: 108T559] supported by the Scientific and Technological Research Council of Turkey (TUBITAK). We are indebted to TUBITAK for the financial support it has provided. The authors wish to thank Professor Hilal Ozdag for advice and comments and Y.E. Dincaslan for his help in obtaining some of the specimens. The author(s) wish to acknowledge use of the Maptool program for analysis and graphics in this paper. Maptool is a product of SEATURTLE.ORG. (Information is available at http://www.seaturtle.org). The present work was partially supported by the Biotechnology Institute of Ankara University.en_US
dc.identifier.doi10.1016/j.bse.2013.06.003
dc.identifier.endpage418en_US
dc.identifier.issn0305-1978
dc.identifier.issn1873-2925
dc.identifier.issn0305-1978en_US
dc.identifier.issn1873-2925en_US
dc.identifier.scopusqualityN/Aen_US
dc.identifier.startpage411en_US
dc.identifier.urihttps://doi.org/10.1016/j.bse.2013.06.003
dc.identifier.urihttps://hdl.handle.net/11454/49091
dc.identifier.volume50en_US
dc.identifier.wosWOS:000325597600060en_US
dc.identifier.wosqualityQ3en_US
dc.indekslendigikaynakWeb of Scienceen_US
dc.indekslendigikaynakScopusen_US
dc.language.isoenen_US
dc.publisherPergamon-Elsevier Science Ltden_US
dc.relation.ispartofBiochemical Systematics and Ecologyen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/closedAccessen_US
dc.subjectPseudopus apodusen_US
dc.subject16S rRNAen_US
dc.subjectCytochrome ben_US
dc.subjectMitochondrial DNAen_US
dc.subjectPopulation geneticsen_US
dc.titleGenetic structuring of Pseudopus apodus (Pallas, 1775) (Sauria: Anguidae) in north Anatolia, Turkeyen_US
dc.typeArticleen_US

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