Diversity of and Selection Acting on Cylindrospermopsin cyrB Gene Adenylation Domain Sequences in Florida
Küçük Resim Yok
Tarih
2011
Yazarlar
Dergi Başlığı
Dergi ISSN
Cilt Başlığı
Yayıncı
Amer Soc Microbiology
Erişim Hakkı
info:eu-repo/semantics/openAccess
Özet
Aphanizomenon ovalisporum is the only confirmed cylindrospermopsin producer identified in the United States to date. On the other hand, Cylindrospermopsis raciborskii is a prominent feature of many lakes in Florida and other regions of the United States. To see the variation in cylindrospermopsin cyrB gene adenylation domain sequences and possibly discover new cylindrospermopsin producers, we collected water samples for a 3-year period from 17 different systems in Florida. Positive amplicons were cloned and sequenced, revealing that approximately 92% of sequences were A. ovalisporum-like (> 99% identity). Interestingly, 6% of sequences were very similar (> 99% identity) to cyrB sequences of C. raciborskii from Australia and of Aphanizomenon sp. from Germany. Neutrality tests suggest that A. ovalisporum-like cyrB adenylation domain sequences are under purifying selection, with abundant low-frequency polymorphisms within the population. On the other hand, when compared between species by codon-based methods, amino acids of CyrB also seem to be under purifying selection, in accordance with the one proposed amino acid thought to be activated by the CyrB adenylation domain.
Açıklama
Anahtar Kelimeler
Kaynak
Applied and Environmental Microbiology
WoS Q Değeri
Q1
Scopus Q Değeri
Q1
Cilt
77
Sayı
7
